{"id":14,"date":"2023-12-01T20:15:45","date_gmt":"2023-12-01T19:15:45","guid":{"rendered":"https:\/\/eventos.cmm.uchile.cl\/metabolicclub\/?p=14"},"modified":"2025-07-07T17:45:12","modified_gmt":"2025-07-07T21:45:12","slug":"workshop-metabolic-club","status":"publish","type":"post","link":"https:\/\/eventos.cmm.uchile.cl\/metabolicclub\/2023\/12\/workshop-metabolic-club\/","title":{"rendered":"Metabolic Club I"},"content":{"rendered":"<h3>Date: January 12 and 16, 2024<\/h3>\n<p>The aim of this workshop is to discuss on modern techniques to analyze the metabolic capacity of organisms and communities. Some topics to be included: genome scale metabolic reconstruction, flux analyses, metabolic response to environment, etc.<\/p>\n<h3>Venue:<\/h3>\n<p>Seminar Room<br \/>\nDepartment of Mathematical Engineering<br \/>\nUniversity of Chile<br \/>\nNorth Building, 5th floor<br \/>\nBeauchef 851, Santiago<\/p>\n<h3>Organizing Committee<\/h3>\n<ul>\n<li>Vicente Acu\u00f1a, Universidad de Chile<\/li>\n<li>Alejandro Maass, Universidad de Chile<\/li>\n<li>Sebasti\u00e1n Mendoza, Universidad de Chile<\/li>\n<\/ul>\n<p>[su_divider top=&#8221;no&#8221; text=&#8221;Go to top \u2303&#8221; divider_color=&#8221;#EA2B20&#8243;]<\/p>\n<h2>Program<\/h2>\n<p>[su_divider text=&#8221;Go to top \u2303&#8221; divider_color=&#8221;#EA2B20&#8243; size=&#8221;2&#8243;]<\/p>\n<h3><strong>Friday, January\u00a0 12, 2023<\/strong><\/h3>\n<p>09:45 \u2013 10:00 Reception<\/p>\n<p>10:00 \u2013 11:00 Anne Siegel: &#8220;Study and Comparisons of metabolic maps : adapt to the triptych of knowledge &#8211; data &#8211; scaling up&#8221;<\/p>\n<p>11:00 \u2013 11:30 Coffee break<\/p>\n<p>11:30 \u2013 12:30 Daniel Garrido: &#8220;Modeling metabolic interactions in the gut microbiome: insights into HMO utilization and butyrate production&#8221;<\/p>\n<p>12:30 \u2013 14:30 LUNCH<\/p>\n<p>14:30 \u2013 15:30 \u00c1lvaro Altamirano: &#8220;Development of computational methods for predicting metabolic interactions in microbial consortia&#8221;<\/p>\n<p>15:30 \u2013 16:00 Coffee break<\/p>\n<p>16:00 \u2013 17:00 Cl\u00e9mence Frioux: &#8220;Exploration of microbial ecosystems: from compositional patterns to dynamic metabolic models&#8221; (<a href=\"https:\/\/eventos.cmm.uchile.cl\/metabolicclub\/wp-content\/uploads\/sites\/177\/2023\/12\/cfrioux_workshop_metabolic_club_20240112.pdf\">slides<\/a>)<\/p>\n<p>[su_divider text=&#8221;Go to top \u2303&#8221; divider_color=&#8221;#EA2B20&#8243; size=&#8221;2&#8243;]<\/p>\n<h3><strong>Tuesday, January 16, 2023<\/strong><\/h3>\n<p>09:15 \u2013 09:30 Reception<\/p>\n<p>09:30 \u2013 10:15 Yann Le Cunff: &#8220;Prior knowledge and Machine Learning : Predicting enzyme functions and analyzing patients&#8217; microbiota&#8221;<\/p>\n<p>10:30 \u2013 11:15 Natalia Jimenez: &#8220;What&#8217;s the objective? Applications of genome-scale models: from quantitative to qualitative and everything in between&#8221;<\/p>\n<p>11:30 \u2013 12:15 Marianne Buscaglia: &#8220;Exploring the diversity and adaptations of giant viruses in cold marine environments&#8221;<\/p>\n<p>12:30 \u2013 14:30 LUNCH<\/p>\n<p>14:30 \u2013 15:15 Vicente Acu\u00f1a: &#8220;Unveiling abundance-dependent metabolic phenotypes of a community&#8221;<\/p>\n<p>15:30 \u2013 16:15 Chabname Ghassemi: &#8220;Towards culturing the unculturable: logic and linear programming for seed identification in metabolic networks&#8221;<\/p>\n<p>16:30 \u2013 17:15 Sebasti\u00e1n Mendoza: &#8220;CF-dFBA and End-Point-Optimization: Novel methods to simulate microbial communities&#8217; dynamics and predict cross-feeding metabolites&#8221;<\/p>\n<p>[su_divider text=&#8221;Go to top \u2303&#8221; divider_color=&#8221;#EA2B20&#8243;]<\/p>\n<p>&nbsp;<\/p>\n<p><img loading=\"lazy\" decoding=\"async\" class=\"wp-image-61 alignnone\" src=\"https:\/\/eventos.cmm.uchile.cl\/metabolicclub\/wp-content\/uploads\/sites\/177\/2023\/12\/logo_cmm01.png\" alt=\"\" width=\"97\" height=\"85\" \/>.\u00a0 <img loading=\"lazy\" decoding=\"async\" class=\"wp-image-59 alignnone\" src=\"https:\/\/eventos.cmm.uchile.cl\/metabolicclub\/wp-content\/uploads\/sites\/177\/2023\/12\/cgr.svg\" alt=\"\" width=\"101\" height=\"97\" \/><\/p>\n<p><img loading=\"lazy\" decoding=\"async\" class=\"alignnone wp-image-90\" src=\"https:\/\/eventos.cmm.uchile.cl\/metabolicclub\/wp-content\/uploads\/sites\/177\/2024\/09\/uch.png\" alt=\"\" width=\"138\" height=\"130\" \/><img loading=\"lazy\" decoding=\"async\" class=\"alignnone wp-image-87\" src=\"https:\/\/eventos.cmm.uchile.cl\/metabolicclub\/wp-content\/uploads\/sites\/177\/2024\/09\/cnrs.jpeg\" alt=\"\" width=\"93\" height=\"87\" \/><img loading=\"lazy\" decoding=\"async\" class=\"alignnone wp-image-88\" src=\"https:\/\/eventos.cmm.uchile.cl\/metabolicclub\/wp-content\/uploads\/sites\/177\/2024\/09\/inria.png\" alt=\"\" width=\"145\" height=\"136\" \/><\/p>\n","protected":false},"excerpt":{"rendered":"<p>Venue: Seminar Room, Department of Mathematical Engineering, University of Chile. North Building, 5th floor. Beauchef 851, Santiago.<\/p>\n","protected":false},"author":2,"featured_media":0,"comment_status":"closed","ping_status":"closed","sticky":false,"template":"","format":"standard","meta":{"inline_featured_image":false,"footnotes":""},"categories":[2],"tags":[],"class_list":["post-14","post","type-post","status-publish","format-standard","hentry","category-workshop"],"_links":{"self":[{"href":"https:\/\/eventos.cmm.uchile.cl\/metabolicclub\/wp-json\/wp\/v2\/posts\/14","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/eventos.cmm.uchile.cl\/metabolicclub\/wp-json\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/eventos.cmm.uchile.cl\/metabolicclub\/wp-json\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/eventos.cmm.uchile.cl\/metabolicclub\/wp-json\/wp\/v2\/users\/2"}],"replies":[{"embeddable":true,"href":"https:\/\/eventos.cmm.uchile.cl\/metabolicclub\/wp-json\/wp\/v2\/comments?post=14"}],"version-history":[{"count":40,"href":"https:\/\/eventos.cmm.uchile.cl\/metabolicclub\/wp-json\/wp\/v2\/posts\/14\/revisions"}],"predecessor-version":[{"id":124,"href":"https:\/\/eventos.cmm.uchile.cl\/metabolicclub\/wp-json\/wp\/v2\/posts\/14\/revisions\/124"}],"wp:attachment":[{"href":"https:\/\/eventos.cmm.uchile.cl\/metabolicclub\/wp-json\/wp\/v2\/media?parent=14"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/eventos.cmm.uchile.cl\/metabolicclub\/wp-json\/wp\/v2\/categories?post=14"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/eventos.cmm.uchile.cl\/metabolicclub\/wp-json\/wp\/v2\/tags?post=14"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}